BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038A11LP1|AL430477
(878 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1714 1681 0.0
>3x_Contig1714
Length = 18873
Score = 1681 bits (846), Expect = 0.0
Identities = 873/880 (99%), Gaps = 3/880 (0%)
Strand = Plus / Plus
Query: 1 atctccaaagttcaactgttctcttcatttctgacatagagacactccagatagcaccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13471 atctccaaagttcaactgttctcttcatttctgacatagagacactccagatagcaccag 13530
Query: 61 cgccattaaaactgcccggagaagaaagaaatagccttttccgggagtgtgagaagtgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13531 cgccattaaaactgcccggagaagaaagaaatagccttttccgggagtgtgagaagtgaa 13590
Query: 121 cacccttaccaaactcaatagaggacttgacagtgttaaggtcaactaatgtgtcaagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13591 cacccttaccaaactcaatagaggacttgacagtgttaaggtcaactaatgtgtcaagtt 13650
Query: 181 ccaatattaaccagacctctagtgcagagttgccagcatctttgaatatgtagaccttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13651 ccaatattaaccagacctctagtgcagagttgccagcatctttgaatatgtagaccttat 13710
Query: 241 tgaagagcaactgtgatattgcaatataatctacttgatcatgagtccatacgtgcattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13711 tgaagagcaactgtgatattgcaatataatctacttgatcatgagtccatacgtgcattt 13770
Query: 301 ctgcaccaaagaatccatgttcagaggatgctataatatccccccatttccatgggacgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13771 ctgcaccaaagaatccatgttcagaggatgctataatatccccccatttccatgggacgt 13830
Query: 361 cttcgctaggaaagatgatatcatcctctttaatgtaaaacgatggtggaattcctgtat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13831 cttcgctaggaaagatgatatcatcctctttaatgtaaaacgatggtggaattcctgtat 13890
Query: 421 ttaattgttgttagttgtatccgtacactagtcctaggctttgagcagtcacaaataaaa 480
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13891 ttaattgttgtaagttgtatccgtacactagtcctaggctttgagcagtcacaaataaaa 13950
Query: 481 aactgccagatgctgcagcgtta-scccataatgttgaaattttaaagatcttggtccgt 539
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 13951 aactgccagatgctgcagcgttagccccataatgttgaaattttaaagatcttggtccgt 14010
Query: 540 ttaagactatactcccgatattatctacaaattccacttgatttattttacctgaaacca 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14011 ttaagactatactcccgatattatctacaaattccacttgatttattttacctgaaacca 14070
Query: 600 agtatgggatgatattcaatcctggaataattatcacctttcctagttcgttcttattac 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14071 agtatgggatgatattcaatcctggaataattatcacctttcctagttcgttcttattac 14130
Query: 660 aatacttgcaagtcaaaattaaatctggtatctggtcgttgtcaagatcaactatgcmac 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 14131 aatacttgcaagtcaaaattaaatctggtatctggtcgttgtcaagatcaactatgcaac 14190
Query: 720 taacttcttgatagctagacgaaggatccacgatagttataatcttctcaccaaataagt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14191 taacttcttgatagctagacgaaggatccacgatagttataatcttctcaccaaataagt 14250
Query: 780 agatatgaataaattttttaccaggctcagaaacaacaagatagtcataattcgataatc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14251 agatatgaataaattttttaccaggctcagaaacaacaagatagtcataattcgataatc 14310
Query: 840 tgaacttatgaacttttga-ccatmaagagc-gtcatttt 877
||||||||||||||||||| |||| |||||| ||||||||
Sbjct: 14311 tgaacttatgaacttttgacccataaagagcagtcatttt 14350
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6484
Number of Sequences: 1807
Number of extensions: 6484
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 878
length of database: 10,358,551
effective HSP length: 16
effective length of query: 862
effective length of database: 10,329,639
effective search space: 8904148818
effective search space used: 8904148818
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)